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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2020.00479</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Sugar Metabolism of <italic>Scardovia wiggsiae</italic>, a Novel Caries-Associated Bacterium</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Kameda</surname> <given-names>Mai</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/899689/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Abiko</surname> <given-names>Yuki</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/670829/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Washio</surname> <given-names>Jumpei</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/670862/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Tanner</surname> <given-names>Anne C. R.</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Kressirer</surname> <given-names>Christine A.</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/916679/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Mizoguchi</surname> <given-names>Itaru</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Takahashi</surname> <given-names>Nobuhiro</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/670856/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Division of Orthodontics and Dentofacial Orthopaedics, Tohoku University Graduate School of Dentistry</institution>, <addr-line>Sendai</addr-line>, <country>Japan</country></aff>
<aff id="aff2"><sup>2</sup><institution>Division of Oral Ecology and Biochemistry, Tohoku University Graduate School of Dentistry</institution>, <addr-line>Sendai</addr-line>, <country>Japan</country></aff>
<aff id="aff3"><sup>3</sup><institution>Forsyth Institute</institution>, <addr-line>Cambridge, MA</addr-line>, <country>United States</country></aff>
<aff id="aff4"><sup>4</sup><institution>Harvard School of Dental Medicine</institution>, <addr-line>Boston, MA</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Daniela De Biase, Sapienza University of Rome, Italy</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Lin Zeng, University of Florida, United States; Yuqing Li, Sichuan University, China</p></fn>
<corresp id="c001">&#x002A;Correspondence: Nobuhiro Takahashi, <email>nobu-t@dent.tohoku.ac.jp</email></corresp>
<fn fn-type="other" id="fn004"><p>This article was submitted to Microbial Physiology and Metabolism, a section of the journal Frontiers in Microbiology</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>25</day>
<month>03</month>
<year>2020</year>
</pub-date>
<pub-date pub-type="collection">
<year>2020</year>
</pub-date>
<volume>11</volume>
<elocation-id>479</elocation-id>
<history>
<date date-type="received">
<day>23</day>
<month>01</month>
<year>2020</year>
</date>
<date date-type="accepted">
<day>05</day>
<month>03</month>
<year>2020</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2020 Kameda, Abiko, Washio, Tanner, Kressirer, Mizoguchi and Takahashi.</copyright-statement>
<copyright-year>2020</copyright-year>
<copyright-holder>Kameda, Abiko, Washio, Tanner, Kressirer, Mizoguchi and Takahashi</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p><italic>Scardovia wiggsiae</italic> has been detected from caries in children and adolescents and has been suggested to be a caries-associated microorganism. To investigate the cariogenic potential of <italic>S. wiggsiae</italic>, we examined carbohydrate metabolism and acid productivity, the fluoride sensitivity of carbohydrate metabolism and the mechanism by which fluoride inhibits carbohydrate metabolism, and the acid sensitivity of carbohydrate metabolism in this bacterium. <italic>S. wiggsiae</italic> metabolized glucose and reduced the environmental pH to 3.5. It mainly produced acetic acid from glucose, together with small amounts of lactic and formic acid. The 50% inhibitory concentration of fluoride for acid production was 8.0 mM at pH 7.0 and 1.5 mM at pH 5.5, which were much higher than those of representative caries-associated bacteria, such as <italic>Streptococcus mutans</italic>. Metabolomic profiles showed the accumulation of 3-phosphoglycerate and a marked reduction in the pyruvate concentration in the presence of fluoride, suggesting that fluoride inhibits the latter half of glycolysis, including enolase activity. Enolase activity was inhibited by fluoride in <italic>S. wiggsiae</italic>, but it was more fluoride-tolerant than the enolase activity of <italic>S. mutans</italic>. Unlike in <italic>S. mutans</italic>, lactic acid did not inhibit acid production by <italic>S. wiggsiae</italic> at acidic pH. These results indicate that <italic>S. wiggsiae</italic> exhibits high acid production and tolerance to fluoride and lactic acid. <italic>S. wiggsiae</italic> possesses a unique metabolic pathway, the F6PPK shunt, which might allow it to avoid the lactate-formate pathway, including fluoride-sensitive enolase activity, and enable metabolic flow to the fluoride-tolerant acetate pathway. The fluoride tolerance of <italic>S. wiggsiae&#x2019;s</italic> enolase activity also increases the fluoride tolerance of its carbohydrate metabolism. The lactic acid tolerance of <italic>S. wiggsiae&#x2019;s</italic> acid production might result in <italic>S. wiggsiae</italic> having high acidogenic and aciduric potential and make it ecologically competitive in acidic environments, such as caries lesions, where lactic acid predominates.</p>
</abstract>
<kwd-group>
<kwd><italic>Scardovia</italic></kwd>
<kwd>acid production</kwd>
<kwd>fluoride</kwd>
<kwd>Bifid shunt</kwd>
<kwd>metabolome</kwd>
<kwd>caries</kwd>
<kwd>dentistry</kwd>
</kwd-group>
<contract-num rid="cn001">26293439</contract-num>
<contract-num rid="cn001">17H04420</contract-num>
<contract-num rid="cn001">K18K099050</contract-num>
<contract-sponsor id="cn001">Japan Society for the Promotion of Science<named-content content-type="fundref-id">10.13039/501100001691</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="33"/>
<page-count count="9"/>
<word-count count="0"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1">
<title>Introduction</title>
<p>Many children in low income families suffer from early childhood caries (ECC), which remains a public health problem worldwide (<xref ref-type="bibr" rid="B16">Kasebaum et al., 2015</xref>). Such lesions progress rapidly and destroy the primary dentition, and moreover, they increase the risk of caries in the permanent teeth. Furthermore successful treatment is difficult and as many as 50% of children relapse after treatment (<xref ref-type="bibr" rid="B29">Tanner et al., 2011</xref>; <xref ref-type="bibr" rid="B10">Hajishengallis et al., 2017</xref>). The oral biofilm is involved in the formation of ECC and is derived from various factors, such as oral bacteria on the dentin surface, saliva, and dietary carbohydrates (<xref ref-type="bibr" rid="B10">Hajishengallis et al., 2017</xref>). <italic>Scardovia wiggsiae</italic> in addition to <italic>Streptococcus mutans</italic> and other acid-producing bacteria, have also been associated with white spot initial carious lesions and aggressive caries in adolescents (<xref ref-type="bibr" rid="B30">Tanner et al., 2012</xref>; <xref ref-type="bibr" rid="B7">Eriksson et al., 2018</xref>).</p>
<p>While <italic>S. wiggsiae</italic> has been detected in ECC without <italic>S. mutans</italic>, a bacterial complex including <italic>S. mutans</italic> and <italic>S. wiggsiae</italic> characterized adolescents with active caries (<xref ref-type="bibr" rid="B7">Eriksson et al., 2018</xref>). <italic>S. wiggsiae</italic> was isolated from root caries in adults expanding the age range of patients with <italic>S. wiggsiae</italic> associated carious lesions (<xref ref-type="bibr" rid="B19">Mantzourani et al., 2009</xref>). Metabolically <italic>S. wiggsiae</italic> contributes to the acidification of the oral biofilm and is receiving increasing attention as a caries-associated bacterium (<xref ref-type="bibr" rid="B10">Hajishengallis et al., 2017</xref>). Although it is recognized that caries-associated bacteria such as <italic>S. mutans</italic> and <italic>lactobacilli</italic> can cause caries, it has been reported that other caries-associated bacteria, including <italic>S. wiggsiae</italic>, can cause caries even in the absence of the former bacteria, suggesting that it is necessary to clarify the cariogenic potential of the latter bacteria (<xref ref-type="bibr" rid="B4">Chandna et al., 2018</xref>).</p>
<p><italic>Scardovia</italic> is one of the 7 genera of the <italic>Bifidobacteriaceae</italic> family. It is a new bacterial genus and was separated from the genus <italic>Bifidobacterium</italic> in 2002 due to differences in its genome sequence (<xref ref-type="bibr" rid="B15">Jian and Dong, 2002</xref>). <italic>S. wiggsiae</italic> was detected in severe ECC as clone CX010 in 2002 (<xref ref-type="bibr" rid="B2">Becker et al., 2002</xref>). Despite limited information about the metabolic pathways of <italic>S. wiggsiae</italic>, the species mainly produces acetate from glucose. This suggests that, like oral <italic>Bifidobacterium</italic> species, <italic>S. wiggsiae</italic> possesses a unique metabolic pathway called the fructose-6-phosphate pathway (F6PPK shunt) (<xref ref-type="bibr" rid="B23">Ruas-Madiedo et al., 2005</xref>; <xref ref-type="bibr" rid="B24">S&#x00E1;nchez et al., 2005</xref>; <xref ref-type="bibr" rid="B18">Manome et al., 2019</xref>), which differs from the glycolytic pathway the caries-associated <italic>S. mutans</italic>. However, the biochemical properties of carbohydrate metabolism in <italic>S. wiggsiae</italic> remains incomplete. Thus, the purpose of this study was to examine <italic>S. wiggsiae</italic> for (1) carbohydrate metabolism activity and acid productivity, (2) the fluoride sensitivity of carbohydrate metabolism and the mechanism through which fluoride inhibits carbohydrate metabolism, and (3) the acid sensitivity of carbohydrate metabolism.</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec id="S2.SS1">
<title>Bacterial Strains and Growth Conditions</title>
<p><italic>S. wiggsiae</italic> C1A55<sup>T</sup> and <italic>S. mutans</italic> NCTC10449<sup>T</sup> were used. These bacteria were maintained on CDC anaerobe blood agar (Nippon BD, Tokyo, Japan) at 37&#x00B0;C in an anaerobic glove box (N<sub>2</sub>, 80%; H<sub>2</sub>, 10%; CO<sub>2</sub>, 10%; NHC-type; Hirasawa Works, Tokyo, Japan). <italic>S. wiggsiae</italic> C1A55 was cultured in a brain heart infusion (Becton Dickinson, Franklin Lakes, NJ, United States), supplemented with 0.5% glucose and 2% lamb serum, at 37&#x00B0;C in the NHC-type box, while <italic>S. mutans</italic> NCTC10449 was cultured in a tryptone-yeast extract-glucose medium, containing 50 mM potassium phosphate buffer (PPB, pH 7.0) and 0.5% glucose. The bacteria were harvested by centrifugation (15,000 &#x00D7; g, 10 min, 4&#x00B0;C) during the logarithmic growth phase, using double-sealed centrifuge tubes to maintain anaerobic conditions. Then, the bacterial cells were washed with 2 mM PPB (pH 7.0), containing 150 mM KCl and 5 mM MgCl<sub>2</sub>, resuspended in the same buffer at an optical density (660 nm) of 3.5 and stored at 4&#x00B0;C prior to use. All of the subsequent procedures, including the washing and preservation of the cells, were carried out in an anaerobic glove box (N<sub>2</sub>, 90%; H<sub>2</sub>, 10%; NH-type; Hirasawa Works).</p>
</sec>
<sec id="S2.SS2">
<title>Bacteria-Induced pH Reduction and Its Sensitivity to Fluoride</title>
<p>A pH-stat system (AUTO pH-stat, model AUT-211S; Toa Electronics, Tokyo, Japan) was used to measure the pH of the reaction mixture, which contained 2.8 mL of the cell suspension. The pH of the mixture was adjusted to 7.0 by adding 60 mM KOH, as described previously (<xref ref-type="bibr" rid="B17">Kawashima et al., 2013</xref>), before the mixture was pre-incubated at 37&#x00B0;C for 3 min. Potassium fluoride (KF) was added to the mixture at a final concentration of 0&#x2013;25 mM (1 mM = 19.1 ppmF), and then the mixture was further pre-incubated for 4 min. The reduction in pH was started by adding 10 mM glucose, and the pH was measured for 50 min.</p>
</sec>
<sec id="S2.SS3">
<title>Bacterial Acid Production and Its Sensitivity to Fluoride</title>
<p>The reaction mixture containing 2.8 mL of the cell suspension was set to a pH-stat (AUTO pH-stat; model AUT-211S, Toa Electronics) and was adjusted to 7.0 or 5.5 by adding 0.12 N HCl, as described previously (<xref ref-type="bibr" rid="B17">Kawashima et al., 2013</xref>), before the reaction mixture was pre-incubated at 37&#x00B0;C for 3 min. KF was added to the reaction mixture at a final concentration of 0&#x2013;20 mM, before the mixture was subjected to further pre-incubation for 4 min. Acid production was started by adding glucose at a final concentration of 10 mM. The rate of acid production was monitored for 10 min, based on a titration volume of 60 mM KOH, using the pH-stat system. The 50% inhibitory concentration (IC<sub>50</sub>) of fluoride was also calculated.</p>
</sec>
<sec id="S2.SS4">
<title>Acidic End-Products</title>
<p>The concentrations of acidic end-products were analyzed, as described previously (<xref ref-type="bibr" rid="B26">Takahashi et al., 1987</xref>; <xref ref-type="bibr" rid="B21">Norimatsu et al., 2015</xref>). In the experiment described above, the reaction mixture (0.45 mL) was sampled before and 10 min after the addition of glucose. The samples were immediately mixed with 0.05 mL of 6N perchloric acid to terminate bacterial metabolism, before being removed from the anaerobic box and filtered through a polypropylene membrane (pore size: 0.20 &#x03BC;m; Toyo Roshi Ltd., Tokyo, Japan). The filtrates were quantitatively analyzed using high-performance liquid chromatography (Shimadzu Prominence LC-20AD, Shimadzu Co., Ltd., Kyoto, Japan).</p>
</sec>
<sec id="S2.SS5">
<title>Metabolome Analysis</title>
<p>The bacterial suspension was incubated with glucose for 2 min, as described above, in the presence or absence of 5 mM (pH 7.0) or 2 mM (pH 5.5) KF. Before and after the incubation procedure, the reaction mixture was sampled and immediately centrifuged at 10,000 rpm for 2 min in order to separate the cell fraction and supernatant. The metabolites in the cells were extracted from the cell fraction and pre-treated, as reported previously (<xref ref-type="bibr" rid="B28">Takahashi et al., 2010</xref>). The extracted metabolites were analyzed using capillary electrophoresis and time-of-flight mass spectrometry (CE-TOFMS; G1600AX and G1969A; Agilent Technologies, Waldbronn, Germany), as described previously (<xref ref-type="bibr" rid="B28">Takahashi et al., 2010</xref>). The obtained metabolomic data were analyzed using specific software (MassHunter workstation; Agilent Technologies, CA, United States) and 35 metabolites were identified as described previously. The following metabolites were particularly targeted: glucose 6-phosphate (G6P), fructose 6-phosphate (F6P), 3-phosphoglycerate (3PG), phosphoenolpyruvate (PEP), and pyruvate, which are involved in glycolysis, and erythrose 4-phosphate (E4P), sedoheptulose 7-phosphate (S7P), ribose 5-phosphate (Ribo5P), and ribulose 5-phosphate (Ribu5P), which are involved in the F6PPK shunt.</p>
</sec>
<sec id="S2.SS6">
<title>Inhibition of Enzyme Activity by Fluoride</title>
<p><italic>S. wiggsiae</italic> cells were harvested by centrifugation during the logarithmic growth phase, washed twice with 2 mM PPB (pH 7.0), containing 150 mM KCl and 5 mM MgCl<sub>2</sub>, and stored at &#x2212;80&#x00B0;C as a pellet prior to use. The cells were suspended in 2 mM PPB, containing 1 mM dithiothreitol, and then disrupted by sonic oscillation for 10 min at 4&#x00B0;C (200 W, 2 A; Insonator, Kubota, Japan). Cell debris was removed by centrifugation (10,000 &#x00D7; g, 10 min, 4&#x00B0;C), and the enzymatic activity of the resultant cell-free extract (CFE) was assayed. The assay mixture contained 20 mM 2-phosphoglycerate; the CFE; and 0, 2, 5, or 20 mM KF (pH 7.0) in 2 mM PPB (pH 7.0) (<xref ref-type="bibr" rid="B8">Guha-Chowdhury et al., 1997</xref>; <xref ref-type="bibr" rid="B27">Takahashi et al., 1997</xref>). Enzymatic activity was measured by monitoring the production of PEP from 2-phosphoglycerate at 240 nm using a spectrometer (UV-1800; Shimadzu Co., Ltd.).</p>
</sec>
<sec id="S2.SS7">
<title>Effects of Acid on Bacterial Acid Production</title>
<p>The reaction mixtures containing 2.8 mL of cell suspension was set to a pH-stat system and adjusted to pH 7.0 or 5.5. Acetate buffer or lactate buffer was added to the reaction mixture at a final concentration of 0&#x2013;100 mM, and the pH of the reaction mixture was adjusted to 7.0 or 5.5 by adding HCl or KOH, before the reaction mixture was pre-incubated at 37&#x00B0;C for 7 min. Then, 10 mM glucose was added to the mixture, and acid production was monitored as described above.</p>
</sec>
<sec id="S2.SS8">
<title>Statistical Analyses</title>
<p>The data are expressed as mean and standard deviation values and were analyzed using the paired <italic>t</italic>-test, the paired <italic>t</italic>-test combined with Bonferroni&#x2019;s correction, or Dunn&#x2019;s test. Differences associated with <italic>P</italic> &#x003C; 0.05 were considered to be statistically significant.</p>
</sec>
</sec>
<sec id="S3">
<title>Results</title>
<sec id="S3.SS1">
<title>Bacterial Acid Production and Its Tolerance to Fluoride</title>
<p>Since the acidification by bacterial sugar metabolism on the tooth surface is a causative factor of dental caries, the pH reduction after the addition of sugar to bacterial suspension was first analyzed in the present study. The pH remained above pH 6.5 in the absence of glucose, but after the addition of glucose the pH immediately decreased and fell below the critical pH of enamel (pH 5.5), reaching pH 3.56 within 2 h (<xref ref-type="fig" rid="S2.F1">Figure 1A</xref>). The addition of KF inhibited the reduction in pH in a concentration-dependent manner.</p>
<fig id="S2.F1" position="float">
<label>FIGURE 1</label>
<caption><p>Acid production from glucose by <italic>S. wiggsiae</italic> and inhibitory effects of fluoride on such acid production. <bold>(A)</bold> Curves of the reduction in pH from pH 7.0; <bold>(B)</bold> the rates of acid production at pH 7.0 and 5.5. The data are shown as the mean and standard deviation of three independent experiments. Fifty percent inhibitory concentrations (IC<sub>50</sub>) were calculated from the fluoride concentration and the rate of acid production. The significance of difference from the control was analyzed using Dunn&#x2019;s test (&#x002A;<italic>P</italic> &#x003C; 0.05).</p></caption>
<graphic xlink:href="fmicb-11-00479-g001.tif"/>
</fig>
<p>The acid production produced from glucose by <italic>S. wiggisae</italic> was monitored based on titration volume of alkali (KOH) solution which is equivalent to the amount of acid production by using a pH-stat (<xref ref-type="fig" rid="S2.F1">Figure 1B</xref>). The acid production rate of <italic>S. wiggsiae</italic> was 5.9 &#x00B1; 4.0 &#x03BC;L/OD at pH 5.5 and 5.6 &#x00B1; 0.6 &#x03BC;L/OD at pH 7.0, i.e., <italic>S. wiggsiae</italic> exhibited similarly high acid production rates at pH 7.0 and 5.5 (<xref ref-type="fig" rid="S2.F1">Figure 1B</xref>). The addition of KF inhibited acid production in a concentration-dependent manner, but at pH 7.0 acid production continued even at high KF concentrations (20 mM) (<xref ref-type="fig" rid="S2.F1">Figure 1B</xref>). Based on these findings, the IC<sub>50</sub> of fluoride for acid production was calculated, and it was found to be 8.0 mM at pH 7.0 and 1.5 mM at pH 5.5.</p>
</sec>
<sec id="S3.SS2">
<title>Acidic End-Products</title>
<p>Since the profile of acidic end-products suggests metabolic pathways and inhibition steps by KF, acidic end-products were analyzed. Acetic acid accounted for about 70% of the acidic end-products produced from glucose, with the remaining acidic end-products being formic acid at pH 7.0 and formic acid and lactic acid at pH 5.5 (<xref ref-type="table" rid="S3.T1">Table 1</xref>). The addition of KF resulted in a significant decrease in the level of acidic end-products, which was accompanied by an increase in the percentage of acid end-products accounted for by acetic acid to 85&#x2013;90% and reductions in the percentages of acid end-products accounted for by formic and lactic acid.</p>
<table-wrap position="float" id="S3.T1">
<label>TABLE 1</label>
<caption><p>Metabolic end-products from glucose at pH 7.0 and 5.5 by <italic>S. wiggsiae</italic>.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left" colspan="5">Acidic end-products<hr/></td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Substrate</td>
<td valign="top" align="center">Acetate</td>
<td valign="top" align="center">Formate</td>
<td valign="top" align="center">Lactate</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">pH 7.0</td>
<td valign="top" align="left">G (&#x2212;) F (&#x2212;)</td>
<td valign="top" align="center">27.2 &#x00B1; 5.5<sup>&#x2020;</sup> (78.4)<sup>&#x2021;</sup></td>
<td valign="top" align="center">7.52 &#x00B1; 1.8 (21.6)</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (&#x2212;)</td>
<td valign="top" align="center">90.4 &#x00B1; 8.9 (74.4)</td>
<td valign="top" align="center">31.1 &#x00B1; 3.5 (25.6)</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (2.5)</td>
<td valign="top" align="center">80.3 &#x00B1; 8.1 (74.4)&#x002A;&#x002A;</td>
<td valign="top" align="center">27.6 &#x00B1; 3.7 (25.6)</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (5)</td>
<td valign="top" align="center">67.1 &#x00B1; 8.3 (76.0)&#x002A;&#x002A;</td>
<td valign="top" align="center">21.1 &#x00B1; 2.9 (24.0)&#x002A;&#x002A;</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (10)</td>
<td valign="top" align="center">55.8 &#x00B1; 11.7 (81.6)&#x002A;&#x002A;</td>
<td valign="top" align="center">12.6 &#x00B1; 8.2 (18.4)&#x002A;&#x002A;</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (20)</td>
<td valign="top" align="center">54.0 &#x00B1; 7.4 (85.1)&#x002A;&#x002A;</td>
<td valign="top" align="center">9.46 &#x00B1; 2.9 (14.9)&#x002A;&#x002A;</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td valign="top" align="left">pH 5.5</td>
<td valign="top" align="left">G (&#x2212;) F (&#x2212;)</td>
<td valign="top" align="center">27.6 &#x00B1; 5.8 (78.5)</td>
<td valign="top" align="center">7.56 &#x00B1; 2.1 (21.5)</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (&#x2212;)</td>
<td valign="top" align="center">104.8 &#x00B1; 11.1 (71.4)</td>
<td valign="top" align="center">22.9 &#x00B1; 3.1 (15.6)</td>
<td valign="top" align="center">19.0 &#x00B1; 1.8 (12.9)</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (0.5)</td>
<td valign="top" align="center">86.9 &#x00B1; 9.2 (74.7)&#x002A;&#x002A;</td>
<td valign="top" align="center">25.5 &#x00B1; 2.6 (21.9)&#x002A;</td>
<td valign="top" align="center">3.97 &#x00B1; 0.9 (3.4)&#x002A;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (1)</td>
<td valign="top" align="center">76.0 &#x00B1; 7.6 (77.7)&#x002A;&#x002A;</td>
<td valign="top" align="center">21.8 &#x00B1; 2.5 (22.3)</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (2)</td>
<td valign="top" align="center">63.0 &#x00B1; 7.9 (82.3)&#x002A;&#x002A;</td>
<td valign="top" align="center">13.6 &#x00B1; 2.9 (17.7)&#x002A;&#x002A;</td>
<td valign="top" align="center">ND</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">G (+) F (4)</td>
<td valign="top" align="center">67.4 &#x00B1; 9.6 (91.2)&#x002A;&#x002A;</td>
<td valign="top" align="center">6.54 &#x00B1; 1.1 (8.8)&#x002A;&#x002A;</td>
<td valign="top" align="center">ND</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<attrib><italic><sup>&#x2020;</sup>Data are presented as the mean and standard deviation of three independent experiments (&#x03BC;M/OD). <sup>&#x2021;</sup>Relative amount of each acidic end-product compared with the total amount of acidic end-products (%). G, 10 mM glucose; F, fluoride (mM). &#x002A;P &#x003C; 0.05; &#x002A;&#x002A;P &#x003C; 0.01; compared with the amount of acidic end-products produced in the presence of glucose.</italic></attrib>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="S3.SS3">
<title>Effects of Fluoride on the Metabolomic Profile</title>
<p>To investigate the mechanism of inhibition of carbohydrate metabolism, metabolomic analysis was performed on G6P and F6P in the process of glucose uptake and phosphorylation, E4P, S7P, Ribo5P, Ribu5P, and 3PG in the F6PPK shunt, and PEP and Pyruvate in the latter half of the glycolytic pathway. When fluoride was added during glucose metabolism, 3PG accumulated, and the level of pyruvate decreased (<xref ref-type="fig" rid="S3.F2">Figure 2</xref>). Similar trends were observed at pH 7.0 and pH 5.5, and significant accumulation of 3PG was seen after the addition of fluoride at pH 7.0. The accumulation of G6P and E4P was also observed after the addition of fluoride, but these changes were not statistically significant.</p>
<fig id="S3.F2" position="float">
<label>FIGURE 2</label>
<caption><p>Effects of fluoride on the metabolomic profile of <italic>S. wiggsiae</italic> at pH 7.0 and 5.5. Data are shown as the mean and standard deviation of three independent experiments. The significance of differences between the with and without fluoride conditions were analyzed using the paired <italic>t</italic>-test. The level of significance was set at 0.00556, based on Bonferroni&#x2019;s correction (&#x002A;<italic>P</italic> &#x003C; 0.0056).</p></caption>
<graphic xlink:href="fmicb-11-00479-g002.tif"/>
</fig>
</sec>
<sec id="S3.SS4">
<title>Inhibition of Enolase Activity by Fluoride</title>
<p>Since the inhibition of enolase activity by fluoride was predicted from the metabolomic profile, enolase activity was assayed in cell extracts, and its activity was examined at pH 7.0 after the addition of KF. The addition of fluoride inhibited enolase activity in a concentration-dependent manner, i.e., fluoride inhibited enolase activity by &#x003C; 10% at 2 mM (<xref ref-type="table" rid="S3.T2">Table 2</xref>) and by 50% (IC<sub>50</sub>) at 4.6 mM (data not shown).</p>
<table-wrap position="float" id="S3.T2">
<label>TABLE 2</label>
<caption><p>Inhibition of enolase activity by fluoride.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Fluoride concentration</td>
<td valign="top" align="center" colspan="3">Inhibition of enolase activity by fluoride (%)<hr/></td>
</tr>
<tr>
<td valign="top" align="left">(mM)</td>
<td valign="top" align="center"><italic>S. wiggsiae</italic></td>
<td valign="top" align="center"><italic>B. dentium</italic></td>
<td valign="top" align="center"><italic>B. dentium</italic></td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">0.02</td>
<td valign="top" align="center">nt</td>
<td valign="top" align="center">10.4 &#x00B1; 2.5</td>
<td valign="top" align="center">7.6 &#x00B1; 3.3</td>
</tr>
<tr>
<td valign="top" align="left">0.2</td>
<td valign="top" align="center">nt</td>
<td valign="top" align="center">49.4 &#x00B1; 4.7</td>
<td valign="top" align="center">7.6 &#x00B1; 3.3</td>
</tr>
<tr>
<td valign="top" align="left">2</td>
<td valign="top" align="center">8.53 &#x00B1; 4.7</td>
<td valign="top" align="center">96.2 &#x00B1; 1.0</td>
<td valign="top" align="center">94.9 &#x00B1; 2.5</td>
</tr>
<tr>
<td valign="top" align="left">5</td>
<td valign="top" align="center">55.5 &#x00B1; 4.8</td>
<td valign="top" align="center">nt</td>
<td valign="top" align="center">nt</td>
</tr>
<tr>
<td valign="top" align="left">20</td>
<td valign="top" align="center">92.5 &#x00B1; 1.8</td>
<td valign="top" align="center">nt</td>
<td valign="top" align="center">nt</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<attrib><italic>Data are shown as the mean &#x00B1; standard deviation of three independent experiments. Data of B. dentium and S. mutans are adopted from <xref ref-type="bibr" rid="B18">Manome et al. (2019)</xref>. nt, not tested.</italic></attrib>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="S3.SS5">
<title>The Effect of Acid on Bacterial Acid Production</title>
<p>At pH 7.0, neither lactic acid nor acetic acid affected carbohydrate metabolism in <italic>S. mutans</italic> or <italic>S. wiggsiae</italic> (<xref ref-type="fig" rid="S3.F3">Figure 3</xref>). At pH 5.5, lactic acid inhibited the acid production of <italic>S. mutans</italic>, whereas acetic acid did not affect acid production in either bacterium.</p>
<fig id="S3.F3" position="float">
<label>FIGURE 3</label>
<caption><p>Effects of acetic and lactic acids on acid production from glucose by <italic>S. wiggsiae</italic>. The significance of differences from the control was analyzed using Dunn&#x2019;s test (&#x002A;<italic>P</italic> &#x003C; 0.05).</p></caption>
<graphic xlink:href="fmicb-11-00479-g003.tif"/>
</fig>
</sec>
</sec>
<sec id="S4">
<title>Discussion</title>
<p><italic>S. wiggsiae</italic> produced acid from glucose and reduced the environmental pH to 3.5 (<xref ref-type="fig" rid="S2.F1">Figure 1A</xref>), demonstrating that this bacterium exhibits high acid productivity and tolerance to acidic conditions. In addition, the rate of acid production was similar at both pH 7.0 and 5.5 (<xref ref-type="fig" rid="S2.F1">Figure 1B</xref>), indicating that the acid production pathways of <italic>S. wiggsiae</italic> are acid-tolerant. This result agrees with the findings of a previous study, which demonstrated that <italic>S. wiggsiae</italic> could grow and produce acid at a low pH (<xref ref-type="bibr" rid="B31">Tanner et al., 2018</xref>). In addition, <italic>S. wiggsiae</italic> is primarily an anaerobic bacterium whereas <italic>S. mutans</italic> is a facultative anaerobic bacterium, suggesting that <italic>S. wiggsiae</italic> can survive and continue to produce acid under more mature biofilm with low oxygen concentration. These facts suggest that acid product from <italic>S. wiggsiae</italic> could induce hydroxyapatite demineralization and facilitate caries progression by lowering the pH of the oral biofilm. A previous study found that mutans streptococci, which have high cariogenic potential, can reduce the environmental pH to 3.5 (<xref ref-type="bibr" rid="B1">Aizawa et al., 2009</xref>), which suggests that the acid productivity and acid tolerance of <italic>S. wiggsiae</italic> are equivalent to those of <italic>S. mutans</italic>. This might be one of the reasons why <italic>S. wiggsiae</italic> is frequently detected in caries lesions (<xref ref-type="bibr" rid="B30">Tanner et al., 2012</xref>; <xref ref-type="bibr" rid="B5">Colombo et al., 2017</xref>; <xref ref-type="bibr" rid="B4">Chandna et al., 2018</xref>).</p>
<p>As was reported for <italic>Bifidobacterium dentium</italic> and <italic>Bifidobacterium longum</italic>, acetic acid was the main acidic end-product by <italic>S. wiggsiae</italic> (<xref ref-type="table" rid="S3.T1">Table 1</xref>), whereas many caries-associated bacteria, such as mutans streptococci, predominantly produce lactic acid (<xref ref-type="bibr" rid="B18">Manome et al., 2019</xref>). This suggests that <italic>S. wiggsiae</italic>, like <italic>Bifidobacterium</italic> species, metabolizes sugars via the F6PPK shunt and produces acetic acid as an acidic end-product (<xref ref-type="fig" rid="S3.F4">Figure 4</xref>). In the whole genome sequence of <italic>S. wiggisiae</italic> F0424, the gene sequences of two key enzymes of the F6PPK shunt, transaldolase and transketolase (<xref ref-type="fig" rid="S3.F4">Figure 4</xref>), have been assigned<sup><xref ref-type="fn" rid="footnote1">1</xref></sup>, supporting the involvement of the F6PPK shunt in the sugar metabolism of <italic>S. wiggsiae</italic>. The F6PPK shunt is a metabolic pathway, in which the F6P produced by the phosphorylation of glucose is continuously degraded by the enzymatic activities of transaldolase and transketolase, before it finally enters the latter half of glycolysis via G3P and produces lactic and formic acids (the lactate-formate pathway), or is used to convert acetyl phosphate to acetic acid (the acetate pathway) (<xref ref-type="fig" rid="S3.F4">Figure 4</xref>). In addition to acetic acid, <italic>S. wiggsiae</italic> also produced small amounts of formic and lactic acids (<xref ref-type="table" rid="S3.T1">Table 1</xref>), indicating that it utilizes both of the abovementioned pathways. Only acetic and formic acids were produced at pH 7.0, while lactic acid was also produced at pH 5.5 (<xref ref-type="table" rid="S3.T1">Table 1</xref>), suggesting that a metabolic shift between lactic and formic acids occurred in the lactate-formate pathway. Lactate dehydrogenase, responsible for lactic acid production, was reported to function under acidic conditions in oral streptococci, whereas pyruvate formate lyase responsible for formic acid production functions at neutral pH, because of differences between their optimum pH (<xref ref-type="bibr" rid="B13">Iwami et al., 1992</xref>). This could also be the case in <italic>S. wiggsiae</italic>. In addition, a previous study found that compared with lactic acid a greater proportion of acetic acid is non-ionized in low pH environments, and hence, acetic acid is more likely to penetrate into enamel and decalcify it from inside than lactic acid (<xref ref-type="bibr" rid="B12">Hoppenbrouwers and Driessens, 1988</xref>), suggesting that acetic acid-producing bacteria, such as <italic>S. wiggsiae</italic>, induce caries formation and encourage caries to progress via different mechanisms to lactic acid-producing bacteria, such as <italic>S. mutans</italic>.</p>
<fig id="S3.F4" position="float">
<label>FIGURE 4</label>
<caption><p>Proposed metabolic pathways for glucose metabolism in <italic>S. wiggsiae</italic>. X mark, a step assumed to be inhibited by fluoride; G6P; glucose 6-phospahte; F6P, fructose 6-phosphate; E4P, erythrose 4-phosphate; S7P, sedoheptulose 7-phosphate; G3P, glyceraldehyde 3-phosphate; X5p, xylulose 5-phosphate; Ribo5P, ribose 5-phosphate; Ribu5P, ribulose 5-phosphate; 1,3BP, 1,3-bisphosphoglycerate; 3PG, 3-phosphoglycerate; PEP, phosphoenolpyruvate; Acetyl-P, CoA, coenzyme A; TA, transalodolase; TK, transketolase; LDH, lactate dehydrogenase; PFL, pyruvate formate-lyase; LTS, lactic acid transport system.</p></caption>
<graphic xlink:href="fmicb-11-00479-g004.tif"/>
</fig>
<p>The present study revealed that fluoride inhibits acid production by <italic>S. wiggsiae</italic> more efficiently at acidic pH than at neutral pH (<xref ref-type="fig" rid="S2.F1">Figure 1</xref>). Fluoride is present as fluoride ions in the oral cavity, but enters bacterial cells as hydrogen fluoride (<xref ref-type="bibr" rid="B14">Jenkins, 1999</xref>). The hydrogen fluoride in bacterial cells changes back to the ionized form of fluoride, which inhibits enolase, an enzyme involved in glycolysis, and hence, carbohydrate metabolism in <italic>Streptococcus</italic>, <italic>Actinomyces</italic>, and <italic>Bifidobacterium</italic> (<xref ref-type="bibr" rid="B11">Hamilton, 1990</xref>; <xref ref-type="bibr" rid="B20">Marquis, 1990</xref>; <xref ref-type="bibr" rid="B32">Tatevossian, 1990</xref>; <xref ref-type="bibr" rid="B14">Jenkins, 1999</xref>; <xref ref-type="bibr" rid="B33">Vogel et al., 2002</xref>). Since the p<italic>K</italic>a of hydrogen fluoride is 3.17, it is considered that the inhibitory effects of fluoride are increased in acidic environments (<xref ref-type="bibr" rid="B25">Sutton et al., 1987</xref>; <xref ref-type="bibr" rid="B14">Jenkins, 1999</xref>) because the lower the pH of the surrounding environment the more fluorine ions are converted into hydrogen fluoride, and thus, the easier it is for fluoride to enter bacterial cells. It seems likely that a similar phenomenon occurs in <italic>S. wiggsiae</italic>. The current study demonstrated that the IC<sub>50</sub> of fluoride for acid production in <italic>S. wiggsiae</italic> was 8.0 mM at pH 7.0 and 1.5 mM at pH 5.5, which are similar to the values obtained for the <italic>Bifidobacterium</italic> strains examined (16.4 mM at pH 7.0 and 1.5 mM at pH 5.5) and much higher than those for <italic>S. mutans</italic> (2.7 mM at pH 7.0 and 0.3 mM at pH 5.5) (<xref ref-type="bibr" rid="B18">Manome et al., 2019</xref>), suggesting that carbohydrate metabolism pathways in <italic>S. wiggsiae</italic> are highly tolerant to fluoride.</p>
<p>Fluoride also increased the proportion of acetic acid and decreased the proportions of formic and lactic acids among the acidic end-products (<xref ref-type="table" rid="S3.T1">Table 1</xref>), indicating that the lactate-formate pathway is more sensitive to fluoride than the acetate pathway. These results are consistent with the metabolomic profile (<xref ref-type="fig" rid="S3.F2">Figure 2</xref>), which showed that fluoride had little effect on the pathway from glucose uptake through G6P to F6P or on the levels of metabolic intermediates in the F6PPK shunt, whereas it did affect the levels of metabolic intermediates in the lactate-formate pathway (<xref ref-type="fig" rid="S3.F4">Figure 4</xref>). The accumulation of 3PG and the apparent reduction in the pyruvate level (<xref ref-type="fig" rid="S3.F2">Figure 2</xref>) suggest that fluoride inhibits enolase, the enzyme that catalyzes the metabolic reaction between 3PG and pyruvate (<xref ref-type="fig" rid="S3.F4">Figure 4</xref>). Indeed, the present study confirmed that fluoride inhibited enolase activity in a concentration-dependent manner; however, 2 mM fluoride inhibited the enolase activity of <italic>S. mutans</italic> and <italic>B. dentium</italic> by 90% (<xref ref-type="bibr" rid="B18">Manome et al., 2019</xref>), while it only inhibited the activity of <italic>S. wiggsiae</italic> by &#x003C;10%, and the IC<sub>50</sub> value was 4.6 mM, indicating that the enolase of <italic>S. wiggsiae</italic> is more fluoride-tolerant than those of other caries-associated bacteria (<xref ref-type="table" rid="S3.T2">Table 2</xref>). The fact that <italic>S. wiggsiae</italic> possesses a fluoride-tolerant form of enolase might also make its carbohydrate metabolism activity more tolerant to fluoride. Although the reasons for the fluoride tolerance of <italic>S. weggsiae</italic> remain unclear, it is true that the sensitivity of enolase varies among oral bacteria (<xref ref-type="bibr" rid="B8">Guha-Chowdhury et al., 1997</xref>). The mechanism for the difference in fluoride sensitivity might be due to the conformational structure of enolase, since fluoride inhibition is closely related to the binding properties of magnesium, phosphate, and fluoride to the enolase protein (<xref ref-type="bibr" rid="B22">Qin et al., 2006</xref>).</p>
<p>In addition to fluoride, acids produced by bacteria can inhibit their carbohydrate metabolism (<xref ref-type="bibr" rid="B3">Carlsson and Hamilton, 1996</xref>). In the current study, lactic acid inhibited the acid production of <italic>S. mutans</italic> (<xref ref-type="fig" rid="S3.F3">Figure 3</xref>). This was considered to be due to the lactic acid transport system used by <italic>S. mutans</italic> for lactic acid excretion (<xref ref-type="bibr" rid="B3">Carlsson and Hamilton, 1996</xref>; <xref ref-type="bibr" rid="B6">Dashper and Reynolds, 1996</xref>) that caused lactic acid to flow into the bacterial cells and acidified the intracellular pH, and hence, inhibited glucose metabolism. In acidic environments some acetic acid becomes undissociated, permeates through the cell membrane, enters bacterial cells and possibly inactivates bacterial metabolism by acidification, but the efficiency of acetic acid penetration is lower than that of the lactic acid transport system, and its inhibitory effects are considered to be negligible (<xref ref-type="bibr" rid="B9">G&#x00FC;nther et al., 1991</xref>; <xref ref-type="bibr" rid="B3">Carlsson and Hamilton, 1996</xref>; <xref ref-type="bibr" rid="B6">Dashper and Reynolds, 1996</xref>). In the present study, the acid production of <italic>S. wiggsiae</italic> was not affected by lactic acid (<xref ref-type="fig" rid="S3.F3">Figure 3</xref>), presumably because <italic>S. wiggsiae</italic> does not possess a lactic acid transport system (<xref ref-type="bibr" rid="B9">G&#x00FC;nther et al., 1991</xref>). In highly cariogenic environments, i.e., acidic environments in which a large amount of lactic acid is present, <italic>S. mutans</italic> might decrease its ability to metabolize carbohydrates and produce acid, whereas <italic>S. wiggsiae</italic> could continue to produce acid, suggesting that <italic>S. wiggsiae</italic> has high acidogenic and aciduric potential. This property might also make <italic>S. wiggsiae</italic> ecologically competitive in acidic environments, such as caries lesions.</p>
</sec>
<sec id="S5">
<title>Conclusion</title>
<p>The present study revealed that <italic>S. wiggsiae</italic> has high acid productivity and tolerance to fluoride and lactic/acetic acids. The acid productivity and acid tolerance of <italic>S. wiggsiae</italic> is thought to be equivalent to those of <italic>S. mutans</italic>. <italic>S. wiggsiae</italic> possesses a unique metabolic pathway, F6PPK shunt, which might contribute to its fluoride and acid tolerance by maintaining the metabolic flow to the fluoride-tolerant acetic acid-pathway. The tolerance of acid production to lactic acid may also provide <italic>S. wiggsiae</italic> with high ecological competitiveness in acidic environments such as caries lesions.</p>
</sec>
<sec id="S6">
<title>Data Availability Statement</title>
<p>All datasets generated for this study are included in the article/supplementary material.</p>
</sec>
<sec id="S7">
<title>Author Contributions</title>
<p>MK contributed to data acquisition and interpretation, drafted, and critically revised the manuscript. YA contributed to conception, design, data acquisition and interpretation, drafted and critically revised the manuscript. JW contributed to conception, design, data interpretation, drafted, and critically revised the manuscript for metabolome analysis CE-TOFMS. AT contributed to conception, design and manuscript review. CK contributed to conception and design. IM contributed to conception and design. NT contributed to conception, design, data interpretation, drafted, and critically revised the manuscript. All authors gave their final approval and agreed to be accountable for all aspects of the work.</p>
</sec>
<sec id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> This study was supported in part by Grants-in-Aid for Scientific Research (B) Nos. 26293439, 17H04420, and K18K099050, JSPS, Japan.</p>
</fn>
</fn-group>
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